STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008032annotation not available (572 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
    
 0.900
ENSCHAP00000031133
Dynein, cytoplasmic 1, light intermediate chain 1.
    
 0.774
ENSCHAP00000047826
Dynein, cytoplasmic 1, light intermediate chain 2.
    
 0.774
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.774
ENSCHAP00000024982
annotation not available
    
 
 0.725
ENSCHAP00000022074
Dynactin 1b.
    
 0.694
fam193b
Family with sequence similarity 193 member B.
    
 0.694
ENSCHAP00000053142
Family with sequence similarity 193 member A.
    
 0.694
ENSCHAP00000054744
annotation not available
    
 0.694
LOC105899917
Dynactin subunit 5.
    
  0.680
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.