STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008057annotation not available (716 aa)    
Predicted Functional Partners:
gosr1
Golgi SNAP receptor complex member 1.
    
 0.619
ENSCHAP00000060695
Component of oligomeric golgi complex 3.
    
 0.469
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
    
 
 0.444
cog4
Component of oligomeric golgi complex 4.
    
 0.443
golga5
Golgin A5.
     
 0.433
smim7
Small integral membrane protein 7.
    
 0.428
znf451
Zinc finger protein 451.
    
 
 0.412
ENSCHAP00000024071
Syntaxin 5A.
    
 0.411
LOC105900350
Syntaxin-5-like.
    
 0.411
LOC105909465
MAGUK p55 subfamily member 5-A-like.
    
 
 0.406
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.