STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm29Translocase of inner mitochondrial membrane 29. (264 aa)    
Predicted Functional Partners:
agk
Acylglycerol kinase.
    
 0.997
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.997
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.997
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.996
ENSCHAP00000045474
Cactin.
   
 0.956
ENSCHAP00000003903
tRNA methyltransferase 10B.
   
 
  0.925
ENSCHAP00000046841
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
  0.836
ENSCHAP00000004644
annotation not available
    
 0.820
ENSCHAP00000010390
Ceramide kinase-like.
    
 0.820
ENSCHAP00000021270
Ceramide kinase.
    
 0.820
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.