close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008145Meis homeobox 2a. (435 aa)    
Predicted Functional Partners:
ENSCHAP00000004371
annotation not available
    
0.639
LOC105891883
pre-B-cell leukemia transcription factor 2-like.
    
0.639
ENSCHAP00000012415
annotation not available
    
0.639
ENSCHAP00000048618
annotation not available
    
0.639
ENSCHAP00000048785
pre-B-cell leukemia homeobox 1b.
    
0.639
pbx4
PBX homeobox 4.
    
0.639
ENSCHAP00000055703
WW domain containing transcription regulator 1.
    
 0.612
ENSCHAP00000003017
Integrator complex subunit 8.
    
 0.605
ENSCHAP00000010165
SMAD family member 2.
    
 0.605
smad1
SMAD family member 1.
    
 0.605
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.