STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008267Si:zfos-169g10.2. (524 aa)    
Predicted Functional Partners:
sst
Somatostatin.
   
 0.918
cort
Cortistatin.
     
 0.779
ENSCHAP00000037565
annotation not available
    
  0.688
gnas
GNAS complex locus.
    
  0.688
GNG4
G protein subunit gamma 4.
    
  0.686
ENSCHAP00000039757
Ghrelin/obestatin prepropeptide.
    
 0.668
NPY
Neuropeptide Y.
   
 0.655
ENSCHAP00000002285
Endothelin 1.
    
  0.653
ENSCHAP00000004177
Endothelin 1.
    
  0.653
ENSCHAP00000047713
Endothelin 3b.
    
  0.643
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.