STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008313annotation not available (240 aa)    
Predicted Functional Partners:
ENSCHAP00000010185
tRNA methyltransferase 61A.
   
 0.998
ENSCHAP00000028168
tRNA methyltransferase 61B.
   
 0.993
mettl1
Methyltransferase like 1.
   
 
 0.974
ENSCHAP00000003165
annotation not available
   
 0.950
trmt11
tRNA methyltransferase 11 homolog.
   
 0.944
ENSCHAP00000046841
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
 0.932
trmt112
tRNA methyltransferase subunit 11-2.
   
 
 0.914
ENSCHAP00000003903
tRNA methyltransferase 10B.
   
 
 0.904
ENSCHAP00000011938
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.902
ENSCHAP00000053139
FtsJ RNA 2'-O-methyltransferase 3.
   
  
 0.899
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.