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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl28Mitochondrial ribosomal protein L28. (251 aa)    
Predicted Functional Partners:
ENSCHAP00000010615
Mitochondrial ribosomal protein L4.
   
 
 0.983
mrps18a
Mitochondrial ribosomal protein S18A.
   
   0.979
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.973
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
   
 
 0.970
mrps26
Mitochondrial ribosomal protein S26.
   
 
 0.970
gadd45gip1
GADD45G interacting protein 1.
   
   0.967
ENSCHAP00000019274
Mitochondrial ribosomal protein L40.
   
   0.965
ENSCHAP00000020721
Mitochondrial ribosomal protein L41.
   
   0.965
mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.963
ENSCHAP00000013591
Mitochondrial ribosomal protein L11.
   
   0.962
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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