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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008377Ts translation elongation factor, mitochondrial. (312 aa)    
Predicted Functional Partners:
tufm
Tu translation elongation factor, mitochondrial.
  
 0.999
pdcd11
Programmed cell death 11.
  
 
 0.997
mrrf
Mitochondrial ribosome recycling factor.
  
 
 0.997
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
  
 0.996
mrps9
Mitochondrial ribosomal protein S9.
  
 
 0.996
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.995
ENSCHAP00000035402
Mitochondrial ribosomal protein S6.
  
 
 0.995
ENSCHAP00000050120
Mitochondrial ribosomal protein L9.
  
 
 0.995
mrpl19
Mitochondrial ribosomal protein L19.
  
 0.995
mrpl20
Mitochondrial ribosomal protein L20.
  
 
 0.994
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.