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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA9Neuronal acetylcholine receptor subunit alpha-9-II-like. (548 aa)    
Predicted Functional Partners:
ENSCHAP00000017344
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.831
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.830
ENSCHAP00000030512
Si:ch211-39a7.1.
  
0.756
ENSCHAP00000051863
annotation not available
  
0.754
ENSCHAP00000060035
Si:ch73-380n15.2.
  
0.754
LOC105906770
Neuronal acetylcholine receptor subunit alpha-2-like.
  
 
 
0.636
ENSCHAP00000023968
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
 
0.635
ENSCHAP00000029187
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
  
 
 
0.635
ENSCHAP00000015016
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
  
0.631
ENSCHAP00000009420
Cholinergic receptor, nicotinic, alpha 5.
  
  
0.628
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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