STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008534Phosphoglucomutase 2. (613 aa)    
Predicted Functional Partners:
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.944
PGM1
Phosphoglucomutase-1-like.
   
 0.936
ENSCHAP00000030331
UDP-glucose pyrophosphorylase 2a.
  
 0.926
ENSCHAP00000040655
UDP-glucose pyrophosphorylase 2b.
  
 0.926
ENSCHAP00000010635
annotation not available
  
 
 0.923
ENSCHAP00000043204
Glucose-6-phosphate isomerase b.
  
 
 0.922
dera
Deoxyribose-phosphate aldolase.
  
 
 0.918
ENSCHAP00000037710
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
    
 0.917
ENSCHAP00000009742
Transaldolase 1.
    
 0.916
ENSCHAP00000037940
annotation not available
  
 0.914
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.