STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008552annotation not available (87 aa)    
Predicted Functional Partners:
ENSCHAP00000020841
NADH:ubiquinone oxidoreductase subunit A5.
    
 0.846
gsto1
Glutathione S-transferase omega 1.
    
 0.841
ENSCHAP00000002563
annotation not available
   
  0.836
ENSCHAP00000002718
NADH:ubiquinone oxidoreductase core subunit S3.
   
  0.835
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
   
  0.835
ENSCHAP00000051742
NADH:ubiquinone oxidoreductase subunit B9.
    
  0.833
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
  0.832
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
    
  0.832
ENSCHAP00000019417
NADH:ubiquinone oxidoreductase subunit A6.
    
  0.832
ndufa2
NADH:ubiquinone oxidoreductase subunit A2.
    
  0.832
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.