STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galt4Beta-1,4-galactosyltransferase 4. (358 aa)    
Predicted Functional Partners:
B3GALT1
Beta-1,3-galactosyltransferase 1.
   
 
 0.869
b3gnt3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
   
 
 0.868
b3gnt5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
   
 
 0.868
b3galt2
Beta-1,3-galactosyltransferase 2.
   
 
 0.858
B3GNT4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4.
   
 
 0.854
ENSCHAP00000034799
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
  
  
 
0.851
LOC105891829
Beta-1,4-galactosyltransferase 3-like.
  
  
 
0.851
LOC105911962
Beta-1,3-galactosyltransferase 1-like.
   
 
 0.848
ENSCHAP00000003084
Zgc:162952.
   
 
 0.831
ENSCHAP00000011474
annotation not available
   
 
 0.831
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.