STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbcdTubulin folding cofactor D. (1190 aa)    
Predicted Functional Partners:
tbce
Tubulin folding cofactor E.
    
 0.992
LOC105895571
ADP-ribosylation factor-like protein 2.
    
 0.980
tbcc
Tubulin folding cofactor C.
    
 0.929
rp2
RP2 activator of ARL3 GTPase.
    
 0.874
ENSCHAP00000000488
Prefoldin subunit 4.
    
 
 0.861
mad2l1
Mitotic arrest deficient 2 like 1.
    
   0.857
tbca
Tubulin folding cofactor A.
    
 0.768
ENSCHAP00000006745
annotation not available
   
 
 0.747
ENSCHAP00000007102
Mitotic arrest deficient 1 like 1.
   
 
 0.747
ENSCHAP00000054064
annotation not available
  
  
 0.673
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.