STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000008819Golgi-associated, gamma adaptin ear containing, ARF binding protein 1. (753 aa)    
Predicted Functional Partners:
ENSCHAP00000001768
annotation not available
    
 0.989
ENSCHAP00000002222
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.989
ENSCHAP00000036095
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.989
ENSCHAP00000054324
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 
 0.955
ENSCHAP00000023900
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.948
ENSCHAP00000035718
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
  
0.934
ENSCHAP00000031837
Insulin-like growth factor 2 receptor.
    
 
 0.925
ENSCHAP00000020965
annotation not available
  
  
 
0.855
ENSCHAP00000035674
Beta-secretase 2.
    
 0.825
ENSCHAP00000046426
Beta-secretase 1.
    
 0.825
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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