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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM63BTransmembrane protein 63B. (831 aa)    
Predicted Functional Partners:
dnal4
Dynein axonemal light chain 4.
     
 0.556
atp13a1
ATPase 13A1.
     
 0.555
ENSCHAP00000057597
Sorting nexin 15.
      
 0.542
LOC105897933
Natural resistance-associated macrophage protein 2-like.
   
 
  0.518
ENSCHAP00000006133
Phosphatidylinositol glycan anchor biosynthesis class G.
   
 
 0.430
tmem147
Transmembrane protein 147.
      
 0.420
gbe1
1,4-alpha-glucan branching enzyme 1.
   
 
  0.400
ENSCHAP00000046300
Glucan (1,4-alpha-), branching enzyme 1a.
   
 
  0.400
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.