STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcbd1Pterin-4 alpha-carbinolamine dehydratase 1. (105 aa)    
Predicted Functional Partners:
pah
Phenylalanine hydroxylase.
  
 0.968
ENSCHAP00000017185
Tyrosine hydroxylase 2.
  
 0.968
th
Tyrosine hydroxylase.
  
 0.968
tph2
Tryptophan hydroxylase 2.
  
 0.959
tph1
Tryptophan hydroxylase 1.
  
 0.959
ENSCHAP00000048498
Tryptophan hydroxylase 1b.
  
 0.950
LOC105908699
Dihydropteridine reductase-like.
  
 
 0.906
LOC105908429
Dihydropteridine reductase-like.
  
 
 0.906
hnf1a
HNF1 homeobox A.
    
 
 0.891
iyd
Iodotyrosine deiodinase.
  
 
  0.869
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.