STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009071annotation not available (592 aa)    
Predicted Functional Partners:
tat
Tyrosine aminotransferase.
     
 0.862
rps14
Ribosomal protein S14.
   
 0.770
ENSCHAP00000047683
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.770
LOC105896091
4-hydroxyphenylpyruvate dioxygenase.
     
 0.740
ENSCHAP00000053707
4-hydroxyphenylpyruvate dioxygenase b.
     
 0.740
mrps11
Mitochondrial ribosomal protein S11.
    
 0.733
ENSCHAP00000033002
annotation not available
   
 
 0.713
GOT2
Aspartate aminotransferase, mitochondrial-like.
   
 
 0.713
ENSCHAP00000012603
Glutamic-oxaloacetic transaminase 1, soluble.
     
 0.625
ENSCHAP00000013026
Glutamic-oxaloacetic transaminase 1, soluble.
     
 0.625
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.