STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105889200Green-sensitive opsin-2-like. (351 aa)    
Predicted Functional Partners:
ENSCHAP00000040268
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.923
ENSCHAP00000044904
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.904
grk1
G protein-coupled receptor kinase 1.
   
 0.890
LOC105906643
Rhodopsin kinase-like.
   
 0.878
GNAT2
Guanine nucleotide-binding protein G(t) subunit alpha-3-like.
   
 0.873
LOC105897302
Guanine nucleotide-binding protein G(t) subunit alpha-1-like.
   
 0.873
ENSCHAP00000034886
S-antigen; retina and pineal gland (arrestin) a.
   
 0.857
ENSCHAP00000051857
S-antigen; retina and pineal gland (arrestin) b.
   
 0.854
gnb2
G protein subunit beta 2.
    
 0.795
LOC105899196
Guanine nucleotide-binding protein subunit beta-4.
    
 0.795
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.