STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009141BCL3 transcription coactivator. (626 aa)    
Predicted Functional Partners:
ENSCHAP00000009119
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
    
0.898
ENSCHAP00000061212
Cylindromatosis (turban tumor syndrome), like.
    
 0.884
ENSCHAP00000026261
annotation not available
    
 0.883
ENSCHAP00000003886
Cylindromatosis (turban tumor syndrome), b.
    
 0.865
cyld
CYLD lysine 63 deubiquitinase.
    
 0.865
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.843
ENSCHAP00000008309
V-rel avian reticuloendotheliosis viral oncogene homolog B.
 
 
 0.791
rel
REL proto-oncogene, NF-kB subunit.
 
 
 0.790
rela
RELA proto-oncogene, NF-kB subunit.
 
 
 0.790
ENSCHAP00000020479
annotation not available
    
 0.755
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.