STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009161annotation not available (190 aa)    
Predicted Functional Partners:
CATSPER2
Cation channel sperm associated 2.
    
  0.979
ENSCHAP00000054234
annotation not available
    
  0.979
ENSCHAP00000036272
annotation not available
    
  0.978
synj2bp
Synaptojanin 2 binding protein.
    
  0.910
ENSCHAP00000051342
annotation not available
    
  0.910
ENSCHAP00000004382
annotation not available
    
  0.837
ENSCHAP00000031096
Solute carrier organic anion transporter family, member 4A1.
    
  0.837
SLCO5A1
Solute carrier organic anion transporter family member 5A1.
    
  0.837
ENSCHAP00000010580
Calcium voltage-gated channel subunit alpha1 Ia.
    
  0.836
ENSCHAP00000019073
Calcium voltage-gated channel subunit alpha1 Ib.
    
  0.836
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.