STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009227annotation not available (461 aa)    
Predicted Functional Partners:
LOC105896374
Apolipoprotein C-I-like.
     
 0.821
LOC105894475
Platelet-activating factor acetylhydrolase-like.
     
 0.783
LOC105896398
Apolipoprotein Eb-like.
   
 
 0.767
LOC105901460
Apolipoprotein Eb-like.
   
 
 0.767
ENSCHAP00000025294
annotation not available
    
 0.745
LOC105891813
Serum paraoxonase/arylesterase 2-like.
    
 0.745
apoa4
Apolipoprotein A4.
     
 0.691
ENSCHAP00000057455
Apolipoprotein A-Ia.
     
 0.691
xrcc6
X-ray repair cross complementing 6.
    
 
 0.673
ENSCHAP00000031823
Phospholipase A2, group XV.
     
 0.652
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.