Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009306annotation not available (355 aa)    
Predicted Functional Partners:
ENSCHAP00000028169
Eph receptor B2a.
   
 0.926
ENSCHAP00000034115
Eph receptor B3a.
   
 0.860
ENSCHAP00000044599
annotation not available
   
 0.860
ENSCHAP00000050652
Eph receptor B4a.
   
 0.843
ENSCHAP00000058554
annotation not available
   
 0.843
ENSCHAP00000059068
Eph receptor A4a.
   
 0.833
ENSCHAP00000008645
ephrin-A2b.
     
 0.826
ENSCHAP00000019165
EPH receptor B1.
   
 0.819
ENSCHAP00000062624
Eph receptor A2 a.
   
 0.818
LOC105890846
ephrin-A5-like.
     
 0.802
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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