STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105888957UDP-glucuronosyltransferase 2A1-like. (529 aa)    
Predicted Functional Partners:
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
     
 0.752
LOC105889015
Aromatase-like.
   
 0.646
CYP19A1
Brain aromatase-like.
   
 0.645
LOC105895513
Cytochrome P450 26B1.
   
 0.638
LOC105891210
Cytochrome P450 26A1.
   
 0.638
ENSCHAP00000002442
Cytochrome P450, family 1, subfamily A.
   
 0.630
ENSCHAP00000024099
Hydroxysteroid (17-beta) dehydrogenase 8.
    
  0.627
hsd11b1l
Hydroxysteroid 11-beta dehydrogenase 1 like.
    
  0.625
cbr1
Carbonyl reductase 1.
    
 0.623
LOC105899056
Catechol O-methyltransferase-like.
    
 0.622
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.