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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009356Si:ch211-132f19.7. (1189 aa)    
Predicted Functional Partners:
gnas
GNAS complex locus.
   
 0.920
ENSCHAP00000037565
annotation not available
   
 0.917
CALML6
Calmodulin like 6.
    
 0.897
ENSCHAP00000044122
Calmodulin-like 4b.
    
 0.896
ENSCHAP00000038560
Phosphodiesterase 7A.
    
 0.889
PDE7B
Phosphodiesterase 7B.
    
 0.889
ENSCHAP00000054661
Phosphodiesterase 3B.
    
 0.889
ENSCHAP00000017480
Adenylate cyclase 9.
  
0.882
LOC105899109
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.879
LOC105897337
Guanine nucleotide-binding protein G(k) subunit alpha.
    
 0.871
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.