STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009470Si:dkey-243i1.1. (896 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
    
 
 0.735
ENSCHAP00000061181
OFD1 centriole and centriolar satellite protein.
    
 
 0.704
ENSCHAP00000061804
Fgfr1op N-terminal like.
    
 
 0.661
ENSCHAP00000022203
Pericentriolar material 1.
    
 
 0.660
ENSCHAP00000042590
Centrosomal protein 63.
    
 
 0.627
ENSCHAP00000032063
Danio rerio centrosomal protein 131 (cep131), mRNA.
    
 
 0.562
dph1
Diphthamide biosynthesis 1.
      
 0.535
ENSCHAP00000043072
Centrosomal protein 120.
      
 0.531
ENSCHAP00000007860
Mitochondrial rRNA methyltransferase 3a.
      
 0.528
ENSCHAP00000033444
Coiled-coil domain containing 13.
      
 0.521
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.