Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC105894576Sodium-dependent phosphate transporter 1-A-like. (658 aa)    
Predicted Functional Partners:
slc12a3
Solute carrier family 12 member 3.
     
 0.855
ENSCHAP00000058189
Transient receptor potential cation channel, subfamily M, member 7.
      
 0.765
ENSCHAP00000052768
Solute carrier family 13 member 1.
  
 
 0.756
LOC105889153
Wilms tumor protein homolog.
      
 0.725
ENSCHAP00000025313
Cadherin 17, LI cadherin (liver-intestine).
      
 0.710
ODF3
Outer dense fiber of sperm tails 3.
      
 0.706
ENSCHAP00000035599
annotation not available
     
 0.669
ENSCHAP00000060170
Solute carrier family 12 member 1.
     
 0.669
ENSCHAP00000004435
Paired box 2a.
      
 0.659
ENSCHAP00000019198
Solute carrier family 13 member 4.
  
 
 0.604
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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