STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009525annotation not available (395 aa)    
Predicted Functional Partners:
ENSCHAP00000051093
Junctional adhesion molecule 2a.
    
0.960
ENSCHAP00000000886
Tight junction protein 1b.
    
 0.904
ENSCHAP00000036405
Tight junction protein 1a.
    
 0.904
ENSCHAP00000041859
annotation not available
    
 0.898
ENSCHAP00000011786
Junctional adhesion molecule 2b.
     
0.861
ENSCHAP00000029973
Junctional adhesion molecule 3a.
  
  
 
0.854
LOC105907972
Integrin beta-2-like.
     
 0.850
ENSCHAP00000035381
Integrin, beta 2.
     
 0.850
ENSCHAP00000014824
annotation not available
    
0.826
ENSCHAP00000037784
annotation not available
    
0.826
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.