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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldh18a1Aldehyde dehydrogenase 18 family member A1. (790 aa)    
Predicted Functional Partners:
ENSCHAP00000010007
Aldehyde dehydrogenase 18 family, member A1.
 
 
0.999
oat
Ornithine aminotransferase.
   
 0.970
gmps
Guanine monophosphate synthase.
  
 
 0.950
prodh2
Proline dehydrogenase 2.
   
 0.943
ENSCHAP00000002580
Proline dehydrogenase (oxidase) 1b.
   
 0.943
ENSCHAP00000060373
Proline dehydrogenase (oxidase) 1a.
   
 0.943
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.942
ENSCHAP00000010268
Lengsin, lens protein with glutamine synthetase domain.
    
 0.941
ENSCHAP00000048265
Glutamate-ammonia ligase (glutamine synthase) a.
    
 0.941
ENSCHAP00000056641
Glutamate-ammonia ligase (glutamine synthase) c.
    
 0.941
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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