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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009686annotation not available (847 aa)    
Predicted Functional Partners:
mapk1
Mitogen-activated protein kinase 1.
   
0.916
ENSCHAP00000026943
Mitogen-activated protein kinase 3.
   
0.912
ENSCHAP00000004239
RAD50 interactor 1.
    
 0.879
ENSCHAP00000018051
TSC complex subunit 2.
    
 0.859
stx18
Syntaxin 18.
    
 0.855
ENSCHAP00000009396
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.849
ENSCHAP00000053849
TBC1 domain family, member 7.
     
 0.837
ENSCHAP00000056547
Activating transcription factor 4a.
     
 0.830
ENSCHAP00000013279
Mitogen-activated protein kinase 7.
   
0.774
ENSCHAP00000043611
Activating transcription factor 4b.
     
 0.769
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.