STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009750BR serine/threonine kinase 2b. (741 aa)    
Predicted Functional Partners:
ENSCHAP00000006618
Protein kinase, membrane associated tyrosine/threonine 1.
   
0.814
ENSCHAP00000025216
WEE1 homolog 2 (S. pombe).
   
0.814
prmt5
Protein arginine methyltransferase 5.
    
 0.804
CDC25B
Cell division cycle 25B.
    
 
 0.691
ENSCHAP00000028274
annotation not available
    
 
 0.691
ENSCHAP00000002138
Purinergic receptor P2X, ligand-gated ion channel, 4b.
    
 
 0.606
ENSCHAP00000054800
Activator of transcription and developmental regulator AUTS2 a.
    
 
 0.606
cdc23
Cell division cycle 23.
    
   0.576
anapc10
Anaphase promoting complex subunit 10.
    
   0.575
LOC105904511
Nucleosome assembly protein 1-like 4.
    
   0.570
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.