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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trib2Tribbles pseudokinase 2. (347 aa)    
Predicted Functional Partners:
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.841
ENSCHAP00000042317
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.841
ENSCHAP00000009702
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.752
LOC105901880
5'-AMP-activated protein kinase subunit gamma-1.
   
 0.752
ENSCHAP00000030625
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.752
ENSCHAP00000039515
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit a.
   
 0.752
ENSCHAP00000043581
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.752
ENSCHAP00000006601
Regulatory associated protein of MTOR, complex 1.
    
 0.737
camkk2
Calcium/calmodulin dependent protein kinase kinase 2.
    
0.720
ENSCHAP00000009362
Calcium/calmodulin-dependent protein kinase kinase 1, alpha a.
    
0.720
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.