STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009807Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b. (315 aa)    
Predicted Functional Partners:
ENSCHAP00000025501
CREB binding protein a.
    
 0.955
ENSCHAP00000024681
E1A binding protein p300 a.
    
 0.932
ENSCHAP00000031900
E1A binding protein p300 b.
    
 0.932
ENSCHAP00000045259
Centromere protein P.
    
 0.836
tfap2d
Transcription factor AP-2 delta.
    
 0.751
tfap2e
Transcription factor AP-2 epsilon.
    
 0.679
ENSCHAP00000055322
Transcription factor AP-2 beta.
    
 0.679
tfap2c
Transcription factor AP-2 gamma.
    
 0.679
ENSCHAP00000046806
General transcription factor IIA, 2.
     
 0.638
ENSCHAP00000019191
Forkhead box O4.
     
 0.595
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.