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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009856Gamma-aminobutyric acid (GABA) A receptor, gamma 2. (477 aa)    
Predicted Functional Partners:
LOC105889618
Gamma-aminobutyric acid receptor subunit beta-4-like.
  
0.864
ENSCHAP00000013099
Gamma-aminobutyric acid type A receptor alpha2 subunit a.
  
0.856
ENSCHAP00000021701
annotation not available
  
0.856
ENSCHAP00000048451
Gamma-aminobutyric acid (GABA) A receptor, alpha 3.
  
0.834
ENSCHAP00000060294
Gamma-aminobutyric acid (GABA) A receptor, zeta.
  
0.834
LOC105900325
Gamma-aminobutyric acid receptor subunit alpha-6-like.
  
0.833
gabra5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
  
0.833
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
  
0.833
ENSCHAP00000022114
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4.
  
0.832
ENSCHAP00000008152
Gamma-aminobutyric acid (GABA) A receptor, alpha 1.
  
0.830
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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