ENSCHAP00000009859 protein (Clupea harengus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000009859

Phosphatidylinositol 4-kinase, catalytic, alpha b. (2054 aa)

Predicted Functional Partners:

sacm1l

0.952

ENSCHAP00000048847

0.917

pcsk9

0.912

ENSCHAP00000011970

0.909

ENSCHAP00000034589

0.909

pikfyve

0.892

pi4k2b

0.889

ENSCHAP00000037623

0.885

ENSCHAP00000018470

0.884

ENSCHAP00000058751

0.884

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000009859	ENSCHAP00000011970	ENSCHAP00000009859	ENSCHAP00000011970	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Tetratricopeptide repeat domain 7B.	0.909
ENSCHAP00000009859	ENSCHAP00000018470	ENSCHAP00000009859	ENSCHAP00000018470	Phosphatidylinositol 4-kinase, catalytic, alpha b.	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	0.884
ENSCHAP00000009859	ENSCHAP00000034589	ENSCHAP00000009859	ENSCHAP00000034589	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Tetratricopeptide repeat domain 7A.	0.909
ENSCHAP00000009859	ENSCHAP00000037623	ENSCHAP00000009859	ENSCHAP00000037623	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Synaptojanin 1.	0.885
ENSCHAP00000009859	ENSCHAP00000048847	ENSCHAP00000009859	ENSCHAP00000048847	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Family with sequence similarity 126 member A.	0.917
ENSCHAP00000009859	ENSCHAP00000058751	ENSCHAP00000009859	ENSCHAP00000058751	Phosphatidylinositol 4-kinase, catalytic, alpha b.	annotation not available	0.884
ENSCHAP00000009859	pcsk9	ENSCHAP00000009859	ENSCHAP00000060768	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Proprotein convertase subtilisin/kexin type 9.	0.912
ENSCHAP00000009859	pi4k2b	ENSCHAP00000009859	ENSCHAP00000043865	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Phosphatidylinositol 4-kinase type 2 beta.	0.889
ENSCHAP00000009859	pikfyve	ENSCHAP00000009859	ENSCHAP00000034772	Phosphatidylinositol 4-kinase, catalytic, alpha b.	Phosphoinositide kinase, FYVE-type zinc finger containing.	0.892
ENSCHAP00000009859	sacm1l	ENSCHAP00000009859	ENSCHAP00000038593	Phosphatidylinositol 4-kinase, catalytic, alpha b.	SAC1 like phosphatidylinositide phosphatase.	0.952
ENSCHAP00000011970	ENSCHAP00000009859	ENSCHAP00000011970	ENSCHAP00000009859	Tetratricopeptide repeat domain 7B.	Phosphatidylinositol 4-kinase, catalytic, alpha b.	0.909
ENSCHAP00000011970	ENSCHAP00000048847	ENSCHAP00000011970	ENSCHAP00000048847	Tetratricopeptide repeat domain 7B.	Family with sequence similarity 126 member A.	0.897
ENSCHAP00000011970	pcsk9	ENSCHAP00000011970	ENSCHAP00000060768	Tetratricopeptide repeat domain 7B.	Proprotein convertase subtilisin/kexin type 9.	0.459
ENSCHAP00000011970	sacm1l	ENSCHAP00000011970	ENSCHAP00000038593	Tetratricopeptide repeat domain 7B.	SAC1 like phosphatidylinositide phosphatase.	0.459
ENSCHAP00000018470	ENSCHAP00000009859	ENSCHAP00000018470	ENSCHAP00000009859	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	Phosphatidylinositol 4-kinase, catalytic, alpha b.	0.884
ENSCHAP00000018470	ENSCHAP00000037623	ENSCHAP00000018470	ENSCHAP00000037623	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	Synaptojanin 1.	0.797
ENSCHAP00000018470	pcsk9	ENSCHAP00000018470	ENSCHAP00000060768	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	Proprotein convertase subtilisin/kexin type 9.	0.861
ENSCHAP00000018470	pi4k2b	ENSCHAP00000018470	ENSCHAP00000043865	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	Phosphatidylinositol 4-kinase type 2 beta.	0.867
ENSCHAP00000018470	pikfyve	ENSCHAP00000018470	ENSCHAP00000034772	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	Phosphoinositide kinase, FYVE-type zinc finger containing.	0.878
ENSCHAP00000018470	sacm1l	ENSCHAP00000018470	ENSCHAP00000038593	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).	SAC1 like phosphatidylinositide phosphatase.	0.881