STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009887annotation not available (177 aa)    
Predicted Functional Partners:
ENSCHAP00000009820
annotation not available
 
      0.900
ENSCHAP00000016927
Si:ch211-175f11.5.
    
 0.793
ENSCHAP00000015065
Spire-type actin nucleation factor 1a.
    
 0.773
ENSCHAP00000009961
Spire-type actin nucleation factor 2.
    
 0.772
ENSCHAP00000051101
Zgc:114123.
    
 0.766
ENSCHAP00000029658
Spire-type actin nucleation factor 1b.
    
 0.754
PFN3
Profilin 3.
    
 0.747
pfn1
Profilin 1.
    
 0.747
ENSCHAP00000017494
annotation not available
    
 0.732
ENSCHAP00000029047
annotation not available
    
 0.732
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.