STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009900STAM binding protein-like 1. (627 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.962
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
   
 0.950
rps27a
Ribosomal protein S27a.
   
 0.950
ENSCHAP00000030291
Ubiquitin B.
    
 0.949
ENSCHAP00000030857
annotation not available
   
 0.947
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.945
ENSCHAP00000006174
Proteasome 26S subunit, non-ATPase 12.
   
 0.940
ENSCHAP00000005325
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.932
ENSCHAP00000016544
Proteasome 26S subunit, non-ATPase 3.
   
 0.930
ENSCHAP00000046982
Proteasome 26S subunit, non-ATPase 1.
   
 0.924
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.