close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009922Synaptotagmin IIa. (420 aa)    
Predicted Functional Partners:
ENSCHAP00000008243
annotation not available
   
 0.955
snap25
Synaptosome associated protein 25.
   
 0.955
STON2
Stonin 2.
   
 0.939
LOC105909676
Synaptosomal-associated protein 25-like.
   
 0.926
vamp3
Vesicle associated membrane protein 3.
    
 0.912
ENSCHAP00000008118
Vesicle-associated membrane protein 2.
   
 0.906
ENSCHAP00000048391
annotation not available
   
 0.906
LOC105901467
Protein S100-A11-like.
    
 
 0.836
STX3
Syntaxin 3.
   
 0.815
ENSCHAP00000006011
annotation not available
   
 0.815
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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