STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000009929La ribonucleoprotein 1, translational regulator. (1073 aa)    
Predicted Functional Partners:
ENSCHAP00000059861
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.915
ENSCHAP00000006601
Regulatory associated protein of MTOR, complex 1.
   
 
 0.885
ENSCHAP00000036066
Mechanistic target of rapamycin kinase.
   
 
 0.854
rpl8
Ribosomal protein L8.
    
 0.854
RPL7A
Ribosomal protein L7a.
   
 0.838
ENSCHAP00000007939
Ribosomal protein S28.
    
  0.834
ENSCHAP00000061631
Ribosomal protein L36.
    
  0.833
rps23
Ribosomal protein S23.
   
 0.830
dhx15
DEAH-box helicase 15.
   
 0.827
rpl11
Ribosomal protein L11.
   
  0.825
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.