STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895537Eukaryotic initiation factor 4A-I-like. (404 aa)    
Predicted Functional Partners:
eif3i
Eukaryotic translation initiation factor 3 subunit I.
   
 0.990
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.987
ENSCHAP00000003974
Receptor for activated C kinase 1.
   
 
 0.973
rps3
Ribosomal protein S3.
   
 0.972
ENSCHAP00000040378
Ribosomal protein S3A.
 
 
 0.967
rpsa
Ribosomal protein SA.
  
 0.965
ENSCHAP00000011153
Eukaryotic translation initiation factor 4A3.
  
0.964
paip1
poly(A) binding protein interacting protein 1.
   
 0.962
ENSCHAP00000012413
annotation not available
   
 0.962
ENSCHAP00000019943
Eukaryotic translation initiation factor 4 gamma, 1a.
   
 0.962
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.