STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010009Phosphatidylinositol glycan anchor biosynthesis, class A. (480 aa)    
Predicted Functional Partners:
ENSCHAP00000019310
Phosphatidylinositol glycan anchor biosynthesis, class P.
    
 0.988
pigc
Phosphatidylinositol glycan anchor biosynthesis class C.
   
 0.987
pigq
Phosphatidylinositol glycan anchor biosynthesis class Q.
    
 0.982
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
    
 0.982
ENSCHAP00000031005
annotation not available
  
 
 0.942
ENSCHAP00000023064
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
    
 0.940
ENSCHAP00000023106
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
    
 0.940
pyurf
PIGY upstream reading frame.
    
 0.927
ephx2
Epoxide hydrolase 2.
  
 0.916
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 0.912
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.