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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010028UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6. (381 aa)    
Predicted Functional Partners:
ENSCHAP00000051462
UDP-glucose ceramide glucosyltransferase.
     
 0.887
ENSCHAP00000045054
annotation not available
     
 0.877
ENSCHAP00000029970
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
     
 0.876
b3gnt5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
   
 
 0.871
ENSCHAP00000009344
Galactosidase, beta 1-like.
     
 0.859
ENSCHAP00000032052
Galactosidase, beta 1.
     
 0.859
gba2
Glucosylceramidase beta 2.
     
 0.857
ENSCHAP00000003796
beta-1,4-N-acetyl-galactosaminyl transferase 1a.
     
 0.855
A3GALT2
Alpha 1,3-galactosyltransferase 2.
     
 0.855
ENSCHAP00000017562
Glucosidase, beta, acid.
     
 0.855
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.