STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010043Zgc:110333. (294 aa)    
Predicted Functional Partners:
ENSCHAP00000024297
Tight junction protein 3.
    
 0.900
LOC105898092
Claudin-10-like.
   
 
0.881
CLDN10
Claudin-10-like.
   
 
0.878
ENSCHAP00000000886
Tight junction protein 1b.
    
 0.871
ENSCHAP00000036405
Tight junction protein 1a.
    
 0.871
ENSCHAP00000042552
Zgc:136892.
  
 
0.867
ENSCHAP00000000072
Claudin i.
  
 
 
0.866
LOC105905446
Claudin-like protein ZF-A9.
  
 
0.865
ENSCHAP00000034774
Claudin 15-like a.
  
 
0.864
LOC105905016
Claudin-3-like.
   
 
0.860
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.