STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010071Intraflagellar transport 88 homolog. (842 aa)    
Predicted Functional Partners:
ENSCHAP00000004032
annotation not available
    
 0.998
ift80
Intraflagellar transport 80.
   
 0.998
ENSCHAP00000045550
Fleer.
    
 0.998
ift81
Intraflagellar transport 81.
   
 0.998
ENSCHAP00000060760
Intraflagellar transport 52 homolog (Chlamydomonas).
  
 
 0.998
ENSCHAP00000024700
Clusterin associated protein 1.
    
 0.997
ENSCHAP00000061772
UBX domain protein 10.
    
  0.996
ift46
Intraflagellar transport 46.
    
 0.995
ENSCHAP00000033353
TNF receptor-associated factor 3 interacting protein 1.
   
 0.994
chdh
Choline dehydrogenase.
    
 0.988
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.