STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010096Methylthioribose-1-phosphate isomerase 1. (353 aa)    
Predicted Functional Partners:
apip
APAF1 interacting protein.
 
 
 0.969
ENSCHAP00000003780
Enolase-phosphatase 1.
 
  
 0.959
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 
 0.926
mtap
Methylthioadenosine phosphorylase.
  
 
 0.907
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
  
 
 0.902
eif2b1
Eukaryotic translation initiation factor 2B subunit alpha.
  
 
0.891
ADD3
Adducin 3.
  
 
 0.885
ENSCHAP00000008234
Adducin 3 (gamma) a.
  
 
 0.885
add1
Adducin 1.
  
 
 0.885
add2
Adducin 2.
  
 
 0.885
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.