STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010216annotation not available (97 aa)    
Predicted Functional Partners:
txndc5
Thioredoxin domain containing 5.
  
 0.981
erp44
Endoplasmic reticulum protein 44.
  
 0.967
ENSCHAP00000000573
Sulfiredoxin 1 homolog (S. cerevisiae).
   
 0.960
ENSCHAP00000049610
annotation not available
  
 0.931
ENSCHAP00000058691
NME/NM23 family member 8.
  
 0.931
prdx5
Peroxiredoxin 5.
   
 0.929
PDIA6
Protein disulfide isomerase family A member 6.
  
 0.927
ENSCHAP00000051131
Protein disulfide isomerase family A, member 6.
  
 0.927
LOC105903933
Thioredoxin-like.
  
 0.908
TXN
Thioredoxin-like.
  
 0.908
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.