STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aslArgininosuccinate lyase. (471 aa)    
Predicted Functional Partners:
ASS1
Argininosuccinate synthase 1.
 
 0.999
ENSCHAP00000026378
N-acetylglutamate synthase.
  
 
 0.999
oat
Ornithine aminotransferase.
  
 
 0.997
ENSCHAP00000020549
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 
 0.928
cps1
Carbamoyl-phosphate synthase 1.
  
 
 0.928
ENSCHAP00000017532
annotation not available
  
 
 0.927
gpr143
G protein-coupled receptor 143.
  
 
 0.927
arg1
Arginase 1.
    
 0.925
arg2
Arginase 2.
    
 0.925
ENSCHAP00000011452
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta.
  
 
 0.920
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.