close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010301Integrin, beta 1b. (817 aa)    
Predicted Functional Partners:
ITGA7
Integrin subunit alpha 7.
   
 0.965
ENSCHAP00000009954
Integrin alpha 4.
   
 0.964
ENSCHAP00000042663
Integrin, alpha 2b.
   
 0.958
ENSCHAP00000015849
Integrin, alpha 10.
   
 0.947
ENSCHAP00000037603
Talin 1.
   
 0.945
ENSCHAP00000007729
annotation not available
   
 0.942
itgb6
Integrin subunit beta 6.
  
 
0.938
itgb5
Integrin subunit beta 5.
  
0.936
LOC105910408
filamin-C-like.
    
 0.934
tln2
Talin 2.
   
 0.933
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.