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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891947Induced myeloid leukemia cell differentiation protein Mcl-1 homolog. (282 aa)    
Predicted Functional Partners:
ENSCHAP00000042234
annotation not available
    
 0.994
LOC105889048
Apoptosis regulator BAX-like.
    
 0.983
ENSCHAP00000054328
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.942
becn1
Beclin 1.
    
 0.919
ENSCHAP00000030175
BCL2 like 1.
    
0.912
LOC105902025
Induced myeloid leukemia cell differentiation protein Mcl-1 homolog.
  
  
 
0.858
ENSCHAP00000030296
BCL2 associated X, apoptosis regulator a.
    
 0.854
ENSCHAP00000010370
BCL2 associated agonist of cell death a.
   
 0.805
ENSCHAP00000035537
BCL2 associated agonist of cell death b.
   
 0.784
pink1
PTEN induced kinase 1.
    
 0.768
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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