STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010459Moloney leukemia virus 10b, tandem duplicate 1. (999 aa)    
Predicted Functional Partners:
ENSCHAP00000060179
Piwi-like RNA-mediated gene silencing 2.
   
 0.801
ENSCHAP00000025840
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.766
ENSCHAP00000011506
Piwi-like RNA-mediated gene silencing 1.
   
 0.711
ENSCHAP00000014159
Tudor domain containing 12.
    
 0.699
ENSCHAP00000034155
annotation not available
    
 0.609
ENSCHAP00000014591
FKBP prolyl isomerase 6.
   
 0.591
LOC105894429
Tudor domain-containing protein 6-like.
    
 0.579
ENSCHAP00000024250
annotation not available
    
 0.579
ENSCHAP00000058248
Tudor domain containing 1.
    
 0.579
ENSCHAP00000007653
VPS41 subunit of HOPS complex.
    
   0.568
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.