cul5 protein (Clupea harengus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

cul5

Cullin 5. (797 aa)

Predicted Functional Partners:

rnf7

0.999

rbx1

0.999

arih2

0.997

ENSCHAP00000007825

0.994

ENSCHAP00000048980

0.994

LOC105900538

0.994

ENSCHAP00000000038

0.993

elob

0.993

ENSCHAP00000032857

0.989

ENSCHAP00000057335

0.987

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000000038	ENSCHAP00000007825	ENSCHAP00000000038	ENSCHAP00000007825	Elongin B.	NEDD8 ubiquitin like modifier, like.	0.973
ENSCHAP00000000038	ENSCHAP00000032857	ENSCHAP00000000038	ENSCHAP00000032857	Elongin B.	Suppressor of cytokine signaling 2.	0.974
ENSCHAP00000000038	ENSCHAP00000048980	ENSCHAP00000000038	ENSCHAP00000048980	Elongin B.	annotation not available	0.980
ENSCHAP00000000038	ENSCHAP00000057335	ENSCHAP00000000038	ENSCHAP00000057335	Elongin B.	annotation not available	0.941
ENSCHAP00000000038	LOC105900538	ENSCHAP00000000038	ENSCHAP00000059950	Elongin B.	Transcription elongation factor B polypeptide 1-like.	0.980
ENSCHAP00000000038	arih2	ENSCHAP00000000038	ENSCHAP00000032454	Elongin B.	Ariadne RBR E3 ubiquitin protein ligase 2.	0.886
ENSCHAP00000000038	cul5	ENSCHAP00000000038	ENSCHAP00000010468	Elongin B.	Cullin 5.	0.993
ENSCHAP00000000038	rbx1	ENSCHAP00000000038	ENSCHAP00000032886	Elongin B.	Ring-box 1.	0.993
ENSCHAP00000000038	rnf7	ENSCHAP00000000038	ENSCHAP00000012341	Elongin B.	Ring finger protein 7.	0.984
ENSCHAP00000007825	ENSCHAP00000000038	ENSCHAP00000007825	ENSCHAP00000000038	NEDD8 ubiquitin like modifier, like.	Elongin B.	0.973
ENSCHAP00000007825	ENSCHAP00000032857	ENSCHAP00000007825	ENSCHAP00000032857	NEDD8 ubiquitin like modifier, like.	Suppressor of cytokine signaling 2.	0.663
ENSCHAP00000007825	ENSCHAP00000048980	ENSCHAP00000007825	ENSCHAP00000048980	NEDD8 ubiquitin like modifier, like.	annotation not available	0.966
ENSCHAP00000007825	LOC105900538	ENSCHAP00000007825	ENSCHAP00000059950	NEDD8 ubiquitin like modifier, like.	Transcription elongation factor B polypeptide 1-like.	0.966
ENSCHAP00000007825	arih2	ENSCHAP00000007825	ENSCHAP00000032454	NEDD8 ubiquitin like modifier, like.	Ariadne RBR E3 ubiquitin protein ligase 2.	0.941
ENSCHAP00000007825	cul5	ENSCHAP00000007825	ENSCHAP00000010468	NEDD8 ubiquitin like modifier, like.	Cullin 5.	0.994
ENSCHAP00000007825	elob	ENSCHAP00000007825	ENSCHAP00000006691	NEDD8 ubiquitin like modifier, like.	Elongin B.	0.973
ENSCHAP00000007825	rbx1	ENSCHAP00000007825	ENSCHAP00000032886	NEDD8 ubiquitin like modifier, like.	Ring-box 1.	0.997
ENSCHAP00000007825	rnf7	ENSCHAP00000007825	ENSCHAP00000012341	NEDD8 ubiquitin like modifier, like.	Ring finger protein 7.	0.983
ENSCHAP00000032857	ENSCHAP00000000038	ENSCHAP00000032857	ENSCHAP00000000038	Suppressor of cytokine signaling 2.	Elongin B.	0.974
ENSCHAP00000032857	ENSCHAP00000007825	ENSCHAP00000032857	ENSCHAP00000007825	Suppressor of cytokine signaling 2.	NEDD8 ubiquitin like modifier, like.	0.663